Overview

Raw Beans is a quality control tool for assessment of data coming off mass spectrometry DDA (Data-Dependent Acquisition) experiments. It is an identification-free tool that can process either Thermo RAW or mzML formats. The results is a HTML report the provides some key data for a quick impression of the quality of the data itself and detect some obvious issues. 

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Git repository is located here: https://bitbucket.org/incpm/prot-qc/src/master/README.md

Downloads section

A tutorial for running RawBeans:

Input Types

There are 3 input types that this tool can handle:

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• It is best if the input files will be located on your local PC, it will be faster and also will avoid network problems.